1. Update the repository and upgrade the system
apt-get update && apt-get dist-upgrade
2. Install the new tools that have been added for R3. make sure you choose the right one because 32-bit and 64-bit tools are different.
32-bit tools
apt-get install libcrafter blueranger dbd inundator intersect mercury cutycapt trixd00r artemisa rifiuti2 netgear-telnetenable jboss-autopwn deblaze sakis3g voiphoney apache-users phrasendrescher kautilya manglefizz rainbowcrack rainbowcrack-mt lynis-audit spooftooph wifihoney twofi truecrack uberharvest acccheck statsprocessor iphoneanalyzer jad javasnoop mitmproxy ewizard multimac netsniff-ng smbexec websploit dnmap johnny unix-privesc-check sslcaudit dhcpig intercepter-ng u3-pwn binwalk laudanum wifite tnscmd10g bluepot dotdotpwn subterfuge jigsaw urlcrazy creddump android-sdk apktool ded dex2jar droidbox smali termineter bbqsql htexploit smartphone-pentest-framework fern-wifi-cracker powersploit webhandler
64-bit tools
apt-get install libcrafter blueranger dbd inundator intersect mercury cutycapt trixd00r rifiuti2 netgear-telnetenable jboss-autopwn deblaze sakis3g voiphoney apache-users phrasendrescher kautilya manglefizz rainbowcrack rainbowcrack-mt lynis-audit spooftooph wifihoney twofi truecrack acccheck statsprocessor iphoneanalyzer jad javasnoop mitmproxy ewizard multimac netsniff-ng smbexec websploit dnmap johnny unix-privesc-check sslcaudit dhcpig intercepter-ng u3-pwn binwalk laudanum wifite tnscmd10g bluepot dotdotpwn subterfuge jigsaw urlcrazy creddump android-sdk apktool ded dex2jar droidbox smali termineter multiforcer bbqsql htexploit smartphone-pentest-framework fern-wifi-cracker powersploit webhandler
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